In silico Rational Designing, Synthesis, Characterization, and Biological Evaluation of Novel Pyrazole Derivatives as Potential Anti-Cancer and Anti-Microbial Agents

Authors

  • Sangeeta Narwal
  • Tilak Dhanda
  • Bhagwati Devi

Keywords:

Pyrazole derivatives, Molecular docking, Anti-cancer, Anti-microbial, Synthesis, Characterization

Abstract

Pyrazole derivatives have garnered significant attention in medicinal chemistry due to their diverse pharmacological activities, including anti-cancer and anti-microbial properties. This study focuses on the in silico rational design, synthesis, and characterization of a series of novel pyrazole-based compounds aimed at addressing microbial resistance and cancer proliferation. Using Schrödinger software suite, molecular docking against matrix metalloproteinase-9 (MMP-9, PDB ID: 6ESM) identified promising leads with binding energies ranging from -7.2 to -9.1 kcal/mol. Fifteen pyrazole derivatives were synthesized via multi-component reactions, achieving yields of 65-92%. Characterization via FTIR, 1H-NMR, 13C-NMR, and HRMS confirmed structural integrity. In vitro anti-microbial assays against Gram-positive (Staphylococcus aureus) and Gram-negative (Escherichia coli) bacteria, as well as fungi (Candida albicans), revealed MIC values as low as 3.12 µg/mL for compound 6. Anti-cancer evaluation on MCF-7 (breast) and HCT-116 (colon) cell lines showed IC50 values of 4.5-12.3 µM, with compound 6 exhibiting superior potency. Pharmacokinetic predictions indicated favorable drug-likeness (Lipinski's rule compliance) and bioavailability scores >0.55. These findings underscore the potential of these pyrazoles as dual-action therapeutic agents, warranting further in vivo studies

Downloads

Download data is not yet available.

References

Al-Sanea MM, Moubayed NMS, Alharbi NS, Govindasamy K, Al-Sanea NA, Alenazi FS, et al. Pyrazole hybrids with coumarin, thiazole, and oxadiazole: antimicrobial efficacy and synthetic strategies (2016-2024). Bioorg Med Chem. 2024;89:117362.

Al-Sanea MM, Moubayed NMS, Alharbi NS, Govindasamy K, Al-Sanea NA, Alenazi FS, et al. Formyl-pyrazole derivatives: dual antimicrobial-anticancer agents via ROS induction. Molecules. 2025;30(3):678.

Antimicrobial Resistance Collaborators. Global burden of bacterial antimicrobial resistance 1990-2021: a systematic analysis with forecasts to 2050. Lancet. 2024;404(10455):1198-217.

Bray F, Laversanne M, Sung H, Ferlay J, Esteban S, Soerjomataram I, et al. Global cancer statistics 2022: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA Cancer J Clin. 2024;74(3):229-63.

Clinical and Laboratory Standards Institute. M07 Ed12: Methods for dilution antimicrobial susceptibility tests for bacteria that grow aerobically. 12th ed. Wayne, PA: CLSI; 2024.

Clinical and Laboratory Standards Institute. M27 Ed4: Reference method for broth dilution antifungal susceptibility testing of yeasts. 4th ed. Wayne, PA: CLSI; 2017.

Daina A, Zoete V. A BOILED-Egg to predict gastrointestinal absorption and brain penetration of small molecules. ChemMedChem. 2016;11(11):618-37.

El-Nakkady SS, Soliman DH, Ahmed MF, Abdel-Aziz M, El-Hashash MA. Diazenyl-aryl pyrazoles as tubulin and Pim-1 kinase disruptors: synthesis and SAR. Arch Pharm (Weinheim). 2024;357(8):e202400012.

Feeny P, Chapman RF, Bakke J, Harvey DJ. The chemistry and pharmacology of 3-n-nonyl-1H-pyrazole from Houttuynia cordata. J Nat Prod. 1959;22(4):321-5.

Furniss BS, Hannaford AJ, Smith PWG, Tatchell AR, eds. Vogel's textbook of practical organic chemistry. 5th ed. London: Longman Scientific & Technical; 1989.

Ghorab MM, Noaman E, Heiba HI, Ismail MMF, Nanci AM, Al-Sanea MM. Sulfamoylphenyl-pyrazole hybrids as carbonic anhydrase inhibitors: synthesis and anticancer evaluation. Bioorg Chem. 2024;142:106953.

Kaur G, Singh A, Kaur R. Anticancer pyrazoles: from molecular targets to clinical translation. Curr Top Med Chem. 2025b;25(15):1345-67.

Kaur G, Singh A, Kaur R. Pyrazole: a versatile scaffold in medicinal chemistry - recent advances and future perspectives. RSC Adv. 2025;15(12):4567-89.

Mosmann T. Rapid colorimetric assay for cellular growth and survival: application to proliferation and cytotoxicity assays. J Immunol Methods. 1983;65(1-2):55-63.

Murray CJL, Ikuta KS, Sharara F, Swetschinski L, Robles Aguilar G, Gray A, et al. Global burden of bacterial antimicrobial resistance in 2019: a systematic analysis. Lancet. 2022;399(10325):629-55.

Shah A, Patel R, Mehta P. Pyrazole derivatives as broad-spectrum antimicrobials: mechanisms and SAR insights. Eur J Med Chem. 2025;268:116245.

Sharma S, Kumar V, Gupta A. Microwave-assisted synthesis of pyrazoles: a green chemistry approach 2014-2024. Green Chem Lett Rev. 2025;18(2):112-30.

Schrödinger. Schrödinger Release 2021-2: Maestro, Schrödinger, LLC, New York, NY, 2021.

Siddiqui N, Ahsan MJ, Ali R, Yar MS. In silico optimization of pyrazoles for MMP-9 inhibition: docking and ADMET studies. J Mol Graph Model. 2025;118:108345.

World Health Organization. Global cancer burden growing, amidst mounting need for services. Geneva: WHO; 2024.

World Health Organization. WHO warns of widespread resistance to common antibiotics worldwide. Geneva: WHO; 2025..

-.

Downloads

Published

2025-06-20

How to Cite

1.
Narwal S, Dhanda T, Devi B. In silico Rational Designing, Synthesis, Characterization, and Biological Evaluation of Novel Pyrazole Derivatives as Potential Anti-Cancer and Anti-Microbial Agents. J Neonatal Surg [Internet]. 2025 Jun. 20 [cited 2025 Dec. 15];14(27S):1194-216. Available from: https://jneonatalsurg.com/index.php/jns/article/view/9626

Similar Articles

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 > >> 

You may also start an advanced similarity search for this article.